Example Datasets (Optional)

Use one of the datasets and parameter settings below to understand how to run Cyber-T:

DNA Microarray ANOVA Data

Help and Download

Protein Array ANOVA Data

Help and Download

Input File

File Format
File to upload

Note: Using the .

Reset

Fields delimited by
Delete rows with no label
Data row start
Number of label columns
Data columns for each condition
Separated by spaces (e.g. '3 3 3' but without quotes)
Trouble uploading

Pre-Processing

Low Value Handling
Do nothing for low values
Set values less than to 0
Offset the values by the lowest value
Normalization
Normalization procedure

Bayesian Standard Deviation

Bayesian Analysis Parameters
Sliding window size
Bayesian confidence value
Blank or 0 gives non-Bayes regularized tests

Post-Processing

Pairwise Post-hoc Tests
Compute pairwise post-hoc tests
Post-hoc procedure
Posterior Probability of Differential Expression
Compute PPDE
Standard Multiple Hypothesis Testing Corrections
Compute multiple test corrections
Plotting Options
Plot with density estimate smoothing
Remove outliers before plotting

This analysis may take SEVERAL MINUTES to run, depending on the server speed, load, and number of data points analyzed.